The 2000xl has 300,000 note/event capacity. The 2000 classic only has 100,000. You can also use more than 1 PGM at a time on the 2000xl, The 2000 classic is only limited to 1 at a time. The 2000xl file system allows folders. The 2000 classic is limited to the root directory.
http://www.mpc-forums.com/viewtopic.php?f=24&t=48606