Same problem here, also installed jjos free 3.10 but still pad problems.
BUT i have got THE solution. A friend of mine helped, he always has cheap ass solutions and some of them gone wrong but this one is a definitely succes.
The problem is the contact within each pad sensor and possible air bubbels beneath the pad sensors. We (He) fixed the existing pad sensors, so don't have to buy new !
First remove the pad sensors. > Here is a example how to:
http://www.youtube.com/watch?v=sm2e4uLLTzM (is in french and a 5000 but i think you can manage

) This guy is fixing a complete new pad sensor and have removed all the paste; we are doing cheap ass *&^# here so leave the paste !
1. rub each sensor with both hands so it warms up (the inner core of each pad can make better contact now) Connect the pad sensor back with the mpc still screwed open and test each pad with the mpc running on the table that you are working on until every pad works, then also with the rubber pads on top of the pad sensors.
Make sure you remove the main power plug every time you connect the pad sensors back to the pcb.
2. take the metal with the paste on it to the kitchen and poor hot water over the paste on the metal (for re-use) and put the pad sensor cautious back on the metal, while putting it back take a piece of plastic and rub the pad sensor on to the metal to release all the air bubbels beneath the pad sensor. Then test the pad sensors again.
3. screw the metal with the pad sensor back on you mpc an run some final tests. DO NOT TOUCH the pad sensor while screwing it back !! Ask a roommate for help ..
This may take a while (for us it did) to rub and test several times, but with enough patience and with sober approach i am convinced this also works for you.
Good luck and hopefully this also save you at least $80 or something like that ..
Peace !
ps. don't forget to put al the screws back into the mpc
